Repository for data and analysis code for mass spectrometry research projects undertaken by Michael Lanzillotti in the Brodbelt Lab at UT Austin.
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1 to 10 of 12 Results
Jul 18, 2024 - Proteo-SAFARI
Lanzillotti, Michael, 2024, "Proteo-SAFARI R Files", https://doi.org/10.18738/T8/22EIRO, Texas Data Repository, V1
Requisite R files for the Proteo-SAFARI app
Jul 17, 2024 - Proteo-SAFARI
Lanzillotti, Michael, 2024, "Protein Top-Down Identified Fragments", https://doi.org/10.18738/T8/H2DF7L, Texas Data Repository, V1, UNF:6:7umNVghi/ZGKHKyHAjhOIA== [fileUNF]
.csv files containing identified fragment ions
Jul 17, 2024 - Proteo-SAFARI
Lanzillotti, Michael; Dunham, Sean; Juetten, Kyle, 2024, "Protein Top-Down .raw Spectra", https://doi.org/10.18738/T8/GNGQND, Texas Data Repository, V1
Thermo Orbitrap .raw spectrum files
Proteo-SAFARI(University of Texas at Austin)
Jul 17, 2024
Data utilized in "Proteo-SAFARI: An R Application for Identification of Fragment Ions in Top-Down MS/MS Spectra of Proteins" showcasing m/z domain identification of protein fragment ion isotopic distributions.
Jun 21, 2024 - tRNA Extract Top-Down Data
Lanzillotti, Michael, 2024, "Yeast tRNA Decoy Searches", https://doi.org/10.18738/T8/CKMCFM, Texas Data Repository, V1
Decoy searches used in validation of yeast tRNA fragment ion identifications.
Jun 21, 2024 - tRNA Extract Top-Down Data
Lanzillotti, Michael, 2024, "Yeast tRNA Theoretical Fragments", https://doi.org/10.18738/T8/VNGFCM, Texas Data Repository, V1
Theoretical fragment ion m/z values for identified yeast tRNA precursor ions. Filenames contain accession ID, sequence modification, and expected precursor charge state.
tRNA Extract Top-Down Data(University of Texas at Austin)
Jun 21, 2024
Data associated with: Top-Down Characterization of a Yeast tRNA Extract by Gas-Phase Fractionation Electron Photodetachment Charge Reduction Mass Spectrometry
May 29, 2024 - Nucleo-SAFARI
Lanzillotti, Michael, 2024, ".raw Spectrum Data", https://doi.org/10.18738/T8/TZCVR6, Texas Data Repository, V1
Associated rawfiles
May 29, 2024 - Nucleo-SAFARI
Lanzillotti, Michael, 2024, "Theoretical fragment isotopic m/z values", https://doi.org/10.18738/T8/8KLJD6, Texas Data Repository, V1
.csv files containing theoretical fragment m/z values generated by Nucleo-SAFARI for let7 precursor and 60 mer DNA sequences.
May 29, 2024 - Nucleo-SAFARI
Lanzillotti, Michael, 2024, "Identified fragment m/z values", https://doi.org/10.18738/T8/C18BEH, Texas Data Repository, V1
Isotopic m/z values of identified fragments from MS/MS spectra of let7 precursors and 60 mer DNA
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