This dataverse contains datasets and scripts (R and Python) used in analyses and visualizations included in Young et al. 2019. "Conserved Transcriptomic Profiles Underpin Monogamy across Vertebrates." PNAS (https://www.pnas.org/content/116/4/1331.long) Briefly, this study compared fore- and mid-brain transcriptomes of reproductive males in monogamous and non-monogamous species pairs of Peromyscus mice, Microtus voles, passeroid birds, dendrobatid frogs, and Xenotilapia species of cichlid fishes. Fore- and mid-brain mRNA of reproductive males samples (n=3) were pooled and sequenced using an Illumina HiSeq 2500. Additional raw and processed data have been deposited in NCBI's Gene Expression Omnibus and are accessible through GEO Series accession number GSE123301: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE123301 Species (abbreviation used for datasets): Microtus ochrogaster (Moch) M. pennsylvanicus (Mpen) Peromyscus californicus (Pcal) P. maniculatus (Pman) Anthus spinoletta (As) Prunella modularis (Dp) Ranitomeya imitator (Ri) Oophaga pumilio (Op) Xenotilapia spilotera (Xspil) X. ornatipinnis (Xorna)
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11 to 20 of 38 Results
tetrapods_DESeq.csv
Jun 5, 2019 - Differential expression in monogamous versus non-monogamous species
Comma Separated Values - 271.7 KB - MD5: c51423294947584d5ff61994cab15354
ALLsp_refGroupsIDs
Dec 11, 2018 - Orthologous Gene Groups (OGGs) and their expression values
Plain Text - 82.9 KB - MD5: 4b6e043312bf40d0147ba3200919a0f3
the subset of OGGs that have membership in all four reference species
As_GalCounts
Dec 11, 2018 - Orthologous Gene Groups (OGGs) and their expression values
Plain Text - 621.6 KB - MD5: 9d18e9d007ac57f74350c41de853664e
As_OGG.tab
Dec 11, 2018 - Orthologous Gene Groups (OGGs) and their expression values
Tabular Data - 263.3 KB - 2 Variables, 7327 Observations - UNF:6:l2BwM6+MPeLvt+nZhZEheA==
Dp_GalCounts
Dec 11, 2018 - Orthologous Gene Groups (OGGs) and their expression values
Plain Text - 888.6 KB - MD5: 74eba57d2a6bece402a4f6c89f43a939
Dp_OGG.tab
Dec 11, 2018 - Orthologous Gene Groups (OGGs) and their expression values
Tabular Data - 319.7 KB - 2 Variables, 8896 Observations - UNF:6:UN++HHJ7lgyFVcfxN7+U3Q==
Moch_OGG.tab
Dec 11, 2018 - Orthologous Gene Groups (OGGs) and their expression values
Tabular Data - 674.1 KB - 2 Variables, 18787 Observations - UNF:6:CCCB+pykRcJgD7vjweYNPg==
Moch_RatCounts
Dec 11, 2018 - Orthologous Gene Groups (OGGs) and their expression values
Plain Text - 3.8 MB - MD5: 462e768fd950541718ca527056de4ec8
Mpen_OGG.tab
Dec 11, 2018 - Orthologous Gene Groups (OGGs) and their expression values
Tabular Data - 538.6 KB - 2 Variables, 14986 Observations - UNF:6:n07C92ht4+mYRsGfZ6zZqw==
Mpen_RatCounts
Dec 11, 2018 - Orthologous Gene Groups (OGGs) and their expression values
Plain Text - 1.3 MB - MD5: a3afcd5c9f5b4f84dfe8e283162f3276
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